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Improving Ligand-Ranking of AutoDock Vina by Changing the Empirical Parameters

T. Ngoc Han Pham, Trung Hai Nguyen, Nguyen Minh Tam, Thien Y Vu, Nhat Truong Pham, Nguyen Truong Huy, Binh Khanh Mai, Nguyen Thanh Tung, Minh Quan Pham, Van V. Vu, Son Tung Ngo

Version 2 posted 12 October 2021

2,975

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Analytical Chemistry

Working Paper

Assessment of Surface Water Quality Using Multivariate Statistical Techniques: A Case Study of Saigon River

Huu-Quang Nguyen, Quoc-Phuong Vuong, Ngoc-Anh Pham-Thi, Thuy-Tien Tran-Thi, Thi-Phuoc Ho, Son Hai Truong Lam

Version 1 posted 09 March 2020

609

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1

Citations

Physical Chemistry

Working Paper

Thermodynamics and Kinetics in Antibody Resistance of the 501Y.V2 SARS-CoV-2 Variant

Son Tung Ngo, Trung Hai Nguyen, Duc-Hung Pham, Nguyen Thanh Tung, Pham Cam Nam

Version 4 posted 18 May 2021

860

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1

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Theoretical and Computational Chemistry

Working Paper

A Benchmark of Popular Free Energy Approaches Revealing the Inhibitors Binding to SARS-CoV2 Mpro

Son Tung Ngo, Nguyen Minh Tam, Pham Minh Quan, Trung Hai Nguyen

Version 2 posted 28 December 2020

822

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Biological and Medicinal Chemistry

Working Paper

Rapid Prediction of Possible Inhibitors for SARS-CoV-2 Main Protease using Docking and FPL Simulations

Pham Minh Quan, Khanh B. Vu, T. Ngoc Han Pham, Le Thi Thuy Huong, Linh Hoang Tran, Nguyen Thanh Tung, Van Vu, Trung Hai Nguyen, Son Tung Ngo

Version 2 posted 10 August 2020

899

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Theoretical and Computational Chemistry

Working Paper

Systematic comparison of Amber and Rosetta energy functions for protein structure evaluation.

Aliza Rubenstein, Kristin Blacklock, Hai Nguyen, David Case, Sagar Khare

Version 2 posted 04 April 2018

1,666

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Theoretical and Computational Chemistry

Working Paper

Characterizing Potential BACE1 Inhibitors from ChEMBL Database using Knowledge- and Physics-Based Approaches

Tung Dao Quang, Dung Do Thi Mai, Quynh Mai Thai, Phuong-Thao Tran, Son Tung Ngo, Trung Hai Nguyen

Version 1 posted 01 April 2025

10

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Physical Chemistry

Working Paper

Insights into the Binding and Covalent Inhibition Mechanism of PF-07321332 to SARS-CoV-2 Mpro

Son Tung Ngo, Trung Hai Nguyen, Nguyen Thanh Tung, Binh Khanh Mai

Version 1 posted 06 September 2021

1,375

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Theoretical and Computational Chemistry

Working Paper

Discovering Neuraminidase Inhibitors via Computational and Experimental Studies

Trung Hai Nguyen, Ngoc Quynh Anh Pham, Quynh Mai Thai, Van V. Van, Son Tung Ngo, Jim-Tong Horng

Version 1 posted 08 May 2024

173

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1

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Refine Search

9 results in Hai Nguyen in Authors: Hai Nguyen

Improving Ligand-Ranking of AutoDock Vina by Changing the Empirical Parameters

Assessment of Surface Water Quality Using Multivariate Statistical Techniques: A Case Study of Saigon River

Thermodynamics and Kinetics in Antibody Resistance of the 501Y.V2 SARS-CoV-2 Variant

A Benchmark of Popular Free Energy Approaches Revealing the Inhibitors Binding to SARS-CoV2 Mpro

Rapid Prediction of Possible Inhibitors for SARS-CoV-2 Main Protease using Docking and FPL Simulations

Systematic comparison of Amber and Rosetta energy functions for protein structure evaluation.

Characterizing Potential BACE1 Inhibitors from ChEMBL Database using Knowledge- and Physics-Based Approaches

Insights into the Binding and Covalent Inhibition Mechanism of PF-07321332 to SARS-CoV-2 Mpro

Discovering Neuraminidase Inhibitors via Computational and Experimental Studies

9 results in Authors: Hai Nguyen