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Theoretical and Computational Chemistry

Working Paper

Exploring Protocols to Build Reservoirs to Accelerate Replica Exchange MD Simulations

koushik kasavajhala, kenneth lam, Carlos Simmerling

Version 1 posted 20 May 2020

483

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Biological and Medicinal Chemistry

Review

NMR snapshots of nascent chains emerging from the ribosome during biosynthesis

Sammy HS Chan, Christopher A Waudby, John Christodoulou

Version 1 posted 03 March 2022

305

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3

Citations

Analytical Chemistry

Working Paper

Multiplexed Conformationally-Selective, Localized Gas-Phase Hydrogen Deuterium Exchange of Protein Ions Enabled by Transmission-Mode Electron Capture Dissociation

Ritu Chaturvedi, Ian Webb

Version 1 posted 15 November 2021

270

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Theoretical and Computational Chemistry

Working Paper

Folding Coarse-Grained Oligomer Models with PyRosetta

Theodore L. Fobe, Christopher C. Walker, Garrett A. Meek, Michael R. Shirts

Version 2 posted 19 May 2022

481

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Theoretical and Computational Chemistry

Working Paper

Improved Estimates of Folding Stabilities and Kinetics with Multiensemble Markov Models

Si Zhang, Yunhui Ge, Vincent Voelz

Version 1 posted 20 February 2024

195

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Analytical Chemistry

Working Paper

A conformation-specific approach to native top-down mass spectrometry

Hannah Britt, Aisha Ben-Younis, Nathanael Page, Konstantinos Thalassinos

Version 2 posted 17 October 2024

280

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Theoretical and Computational Chemistry

Working Paper

Lasso Peptides: Exploring the Folding Landscape of Nature’s Smallest Interlocked Motifs

Gabriel da Hora, Myongin Oh, Marcus Mifflin, Lori Digal, Andrew Roberts, Jessica Swanson

Version 1 posted 14 September 2023

445

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Theoretical and Computational Chemistry

Working Paper

Multi-eGO: model improvements towards the study of complex self-assembly processes

Fran Bacic Toplek, Emanuele Scalone, Bruno Stegani, Cristina Paissoni, Riccardo Capelli, Carlo Camilloni

Version 2 posted 26 October 2023

383

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Theoretical and Computational Chemistry

Working Paper

An Evaluation of Force Field Accuracy for the Mini-Protein Chignolin using Markov State Models

Tim Marshall, Robert Raddi, Vincent Voelz

Version 1 posted 04 March 2024

270

Downloads

Biological and Medicinal Chemistry

Review

Prevalence of the Diffusion Collision Model of Protein Folding In Vivo: A Mechanistic Analysis of the Acceleration of Protein Folding by Peptidyl-Prolyl Isomerase and the GroEL/ES Chaperonin System

Aatmaananda Nayak

Version 1 posted 24 September 2024

105

Downloads

Refine Search

23 results in Protein Folding in Keywords: Protein Folding

Exploring Protocols to Build Reservoirs to Accelerate Replica Exchange MD Simulations

NMR snapshots of nascent chains emerging from the ribosome during biosynthesis

Multiplexed Conformationally-Selective, Localized Gas-Phase Hydrogen Deuterium Exchange of Protein Ions Enabled by Transmission-Mode Electron Capture Dissociation

Folding Coarse-Grained Oligomer Models with PyRosetta

Improved Estimates of Folding Stabilities and Kinetics with Multiensemble Markov Models

A conformation-specific approach to native top-down mass spectrometry

Lasso Peptides: Exploring the Folding Landscape of Nature’s Smallest Interlocked Motifs

Multi-eGO: model improvements towards the study of complex self-assembly processes

An Evaluation of Force Field Accuracy for the Mini-Protein Chignolin using Markov State Models

Prevalence of the Diffusion Collision Model of Protein Folding In Vivo: A Mechanistic Analysis of the Acceleration of Protein Folding by Peptidyl-Prolyl Isomerase and the GroEL/ES Chaperonin System

23 results in Keywords: Protein Folding