What I Learned from Analyzing Accurate Mass Data of 3000 SI Files

14 November 2024, Version 2
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

A Python script for the systematic, high-throughput analysis of accurate mass data was developed and tested on over 3,000 Supporting Information (SI) PDFs from Organic Letters. For each SI file, quadruplets of molecular formula, measured ion, e.g. [M+Na]+, reported calculated and found masses were extracted and analyzed. Interestingly, only one third of the files containing readable accurate mass data were found to be both internally consistent and in compliance with The ACS Guide to Scholarly Communication. The analysis revealed unex¬pected errors and provides actionable advice on how to improve data quality.

Keywords

HRMS
Cheminformatics
Data Checking
High Resolution Mass Spectrometry
Supporting Information
Python

Supplementary weblinks

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.