MOSAEC-DB: A comprehensive database of experimental metal-organic frameworks with verified chemical accuracy suitable for molecular simulations

05 November 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Ongoing developments in computational databases seek to improve the accessibility and breadth of high-throughput screening and materials discovery efforts. Their reliance on experimental crystal structures necessitates significant processing prior to computation in order to resolve any crystallographic disorder or partial occupancies and remove any residual solvent molecules in the case of activated porous materials. Contemporary investigations revealed that deficiencies in the experimental characterization and computational preprocessing methods generated considerable occurrence of structural errors in metal-organic framework (MOF) databases. The MOSAEC MOF database (MOSAEC-DB) tackles these structural reliability concerns through utilization of innovative preprocessing and error analysis protocols applying the concepts of oxidation states and formal charge to exclude erroneous MOF crystal structures. Comprising more than 124k crystal structures, this work maintains the largest and most accurate dataset of experimental MOFs ready for immediate deployment in molecular simulations. The databases’ comparative diversity is demonstrated through its enhanced coverage of the periodic table, expansive quantity of structures, and balance of chemical properties relative to existing MOF databases. Chemical and geometric descriptors, as well as DFT electrostatic potential-fitted charges, are included to facilitate subsequent atomistic simulation and machine-learning (ML) studies. Curated subsets—sampled according to their chemical properties and structural uniqueness—are also provided to further enable ML studies in recognition of the strict demand for duplicate elimination and dataset diversity in such applications.

Keywords

high throughput screening
Materials database
nanoporous materials
metal organic frameworks (MOF)

Supplementary materials

Title
Description
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Title
SI for MOSAEC-DB
Description
Additional information regarding the database construction process (i.e. candidate search, solvent removal, etc.) and structural properties (i.e. chemical composition, geometric distribution, diversity analysis, etc.) of the enclosed MOSAEC-DB crystal structures are provided
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