Highly Rigid, yet Conformationally Adaptable, Bisporphyrin sp2-Cage Receptors Afford Outstanding Binding Affinities, Chelate Cooperativities, and Substrate Selectivities

03 October 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

If we aim to develop efficient synthetic models of protein receptors and enzymes, we must understand the relationships of intra- and intermolecular interactions between hosts and guests and how they mutually influence their conformational ener-gy landscape, so as to adapt to each other to maximize binding energies and enhance substrate selectivities. Here, we intro-duce a novel design of cofacial (ZnII)bisporphyrin cages based on dynamic imine bonding, which is synthetically simple, but at the same time highly robust and versatile, affording receptors composed of only sp2-hybridized C and N atoms. The high structural rigidity of these cages renders them ideal hosts for ditopic molecules that can fit into the cavity and bind to both metal centers, leading to association constants as high as 109 M-1 in chloroform. These strong binding affinities are a consequence of the remarkable chelate cooperativities attained, with effective molarity (EM) values reaching record values of up to 103 M. However, we discovered that the cages can still adapt their structure to a more compact version, able to host slightly smaller guests. Such conformational transition has an energy cost, which can be very different depending on the direction of the imine linkages in the cage skeleton, and which results in EM values 2 to 4 orders of magnitude lower. This interplay between cooperativity and conformational adaptability leads to strong and unusual selectivities. Not only these metalloporphyrin receptors can choose to bind preferably a particular guest, as a function of its size, but also the guest can select which host to bind, as a function now of the host conformational rigidity. Such highly cooperative and selective asso-ciations are lost, however, in related flexible receptors where the imine bonds are reduced.

Keywords

self-assembly
molecular recognition
host-guest chemistry
cooperativity
porphyrin nanocages

Supplementary materials

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Supporting Information
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Experimental details, procedures and compound characterization data (1H and 13C NMR, NOESY and DOSY NMR, as well as by HR-MS, UV-vis, emission and FT-IR spectroscopies, and X-ray diffraction), computational details and additional host-guest supra-molecular complexes information.
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