A deamination-driven biocatalytic cascade for the synthesis of ribose-1-phosphate

19 June 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Ribose-1-phosphate (Rib1P) is a key substrate for the synthesis of difficult-to-access nucleoside analogues by nucleoside phosphorylases. However, its use in preparative synthesis is hampered by low yields and low selectivity during its preparation by conventional methods. Although biocatalysis permits straightforward access to Rib1P directly from natural nucleosides, these transformations are tightly thermodynamically controlled and suffer from low yields and non-trivial work-up procedures. To address these challenges, we developed a biocatalytic cascade that allows near-total conversions of natural guanosine into α-anomerically pure Rib1P. The key to this route is a guanine deaminase, which removes the accumulated guanine byproduct. Under optimised conditions, this cascade proved readily scalable to the gram scale, delivering isolated yields of up to 79% and a purity of 94% without any chromatography. Our cascade approach reduced the need for toxic reagents and purification steps inherent to previous methods, reducing the environmental burden of the route, as confirmed by CHEM21 Zero Pass and E-factor calculations. Thus, our work will broadly strengthen the applicability of nucleoside phosphorylase-mediated chemistry.

Keywords

Ribose-1-phosphate
Pentose-1-phosphate
Cascade
E-factor
Biocatalysis

Supplementary materials

Title
Description
Actions
Title
Supplementary Information for "A deamination-driven biocatalytic cascade for the synthesis of ribose-1-phosphate"
Description
The Supplementary Information contains all experimental information and supplementary experiments. All raw MS and NMR data, as well as each figure's source data (when applicable) from the main manuscript and SI, are freely available externally at zenodo.org
Actions

Supplementary weblinks

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.