Efficient and Accurate pKa Prediction Enabled by Pre-Trained Machine-Learned Interatomic Potentials

08 March 2024, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Quickly and accurately predicting the pKa of small molecules is an important unsolved challenge in computational chemistry: while approaches based on electronic structure theory have shown great promise, the utility of these methods is limited by the considerable expense of the requisite computations. In this study, we investigate AIMNet2, a machine-learned interatomic potential, as a low-cost surrogate for electronic structure theory in pKa prediction. The accuracy of the AIMNet2-based pKa prediction workflow is evaluated over a wide range of compounds and functional groups, and potential sources of error are discussed.

Keywords

pKa prediction
machine learning
conformational searching
implicit solvation

Comments

Comments are not moderated before they are posted, but they can be removed by the site moderators if they are found to be in contravention of our Commenting Policy [opens in a new tab] - please read this policy before you post. Comments should be used for scholarly discussion of the content in question. You can find more information about how to use the commenting feature here [opens in a new tab] .
This site is protected by reCAPTCHA and the Google Privacy Policy [opens in a new tab] and Terms of Service [opens in a new tab] apply.