Abstract
REINVENT4 is a modern open–source generative AI framework for the design of
small molecules. The software utilizes recurrent neural networks and transformer
architectures to drive molecule generation. These generators are seamlessly
embedded within the general machine learning optimization algorithms transfer
learning, reinforcement learning and curriculum learning. REINVENT4 enables
and facilitates de novo design, R-group replacement, library design, linker design,
scaffold hopping and molecule optimization.
This contribution gives an overview of the software and describes its design.
Algorithms and their applications are discussed in detail. REINVENT4 is a command
line tool which reads a user configuration in either TOML or JSON format.
The aim of this release is to provide reference implementations for some of the
most common algorithms in AI based molecule generation. An additional goal
with the release is to create a framework for education and future innovation in
AI based molecular design. The software is available from https://github.com/
MolecularAI/REINVENT4 and released under the permissive Apache 2.0 license.
Supplementary materials
Title
REINVENT 4: Modern Generative AI for Molecular Design (Supplement)
Description
Supplement to the main paper
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