The Nitrile Bis-Thiol Bioconjugation Reaction

14 August 2023, Version 1
This content is a preprint and has not undergone peer review at the time of posting.

Abstract

Electron-poor aryl nitriles are promising reagents for bioconjugation, due to their high electrophilicity and selectivity for reaction with thiols, albeit generally in a reversible manner. A transient species has previously been observed in such reactions, involving the addition of two thiols to the nitrile functional group forming a tetrahedral amino dithioacetal (ADTA). In this work, the reaction of heteroaryl nitriles with bis-thiols is explored in an attempt to generate stable ADTAs, which could facilitate new bioconjugation protocols. By use of a 1,2-dithiol, or the incorporation of an electrophilic trap into the aryl nitrile design, the formation of stable products is achieved. The resultant ‘nitrile bis-thiol’ (NBT) reaction is then explored in the context of protein modification, specifically to carry out antibody conjugation. By addition of these nitriles to the reduced disulfide bond of an antibody fragment it is shown that, depending on the reagent design, cysteine-to-lysine transfer or disulfide bridged NBT products can be generated. Both represent site-selective conjugates and are shown to be stable when challenged with glutathione under physiological conditions, and upon incubation in serum. Furthermore, the NBT reaction is tested on the more challenging context of a full antibody, and all four disulfide bonds are effectively modified by these new one-carbon bridging reagents. Overall, this reaction of heteroaryl-nitriles with bis-thiols is shown to be highly efficient and versatile, of tunable reversibility, and offers enticing prospects as a new addition to the toolbox of biocompatible ‘click’-type reactions.

Keywords

Bioconjugation
Click chemistry
Disulfide bridging
Cysteine-to-lysine transfer
Antibody bioconjugation
Nitrile chemistry

Supplementary materials

Title
Description
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Title
NBT paper supporting information
Description
Supplementary figures and schemes; materials, methods and data for chemical synthesis and bioconjugation
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